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Table 1 Standard input data for GTM

From: GenoTypeMapper: graphical genotyping on genetic and sequence-based maps

Chr

Marker

Genetic position

Physical or genetic position

Lod-value

P1

P2

P3

P4

1A

SNP_1

0.00

12,000

3.0

A

T

A

A

  1. The input data format always requires nine columns. Mandatory information is written in bold, additional information in italics. Information that is not available should be indicated with “NA”. Please note that the chromosome, the marker name, and a physical and/or genetic position must be provided to the program. For more detailed information, see the text.
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Plant Methods

ISSN: 1746-4811